Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472056_05498 | Not Available | Negative | 5561574 - 5561798 | 8253.78 |
| Hypothetical protein | SAMEA3472056_05499 | Not Available | Negative | 5561798 - 5562100 | 11325.8 |
| Hypothetical protein | SAMEA3472056_05500 | Not Available | Negative | 5562100 - 5562324 | 8308.9 |
| Replication gene b protein | SAMEA3472056_05501 | Not Available | Negative | 5562388 - 5562888 | 19941.1 |
| Hypothetical protein | SAMEA3472056_05502 | Not Available | Negative | 5562885 - 5563055 | 6532.22 |
| Cox | SAMEA3472056_05503 | Not Available | Negative | 5563066 - 5563341 | 10301.5 |
| Gpc | SAMEA3472056_05504 | Not Available | Positive | 5563456 - 5563755 | 11018.1 |
| Integrase | SAMEA3472056_05505 | Not Available | Positive | 5563871 - 5564884 | 38320.3 |
| protein | SAMEA3472056_05506 | Not Available | Negative | 5565149 - 5565466 | 11393.8 |
| lipid kinase | SAMEA3472056_05507 | Not Available | Positive | 5565880 - 5566779 | 32017.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





