Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor rcnr | SAMEA3472056_05483 | Not Available | Positive | 5548703 - 5548975 | 10134.5 |
| uncharacterised protein | SAMEA3472056_05484 | Not Available | Negative | 5548916 - 5549035 | 4753.73 |
| hydroxyethylthiazole kinase | SAMEA3472056_05486 | Not Available | Positive | 5549198 - 5549986 | 27386.8 |
| phosphomethylpyrimidine kinase | SAMEA3472056_05487 | Not Available | Positive | 5549983 - 5550783 | 28603.2 |
| 1,4-beta-n-acetylmuramidase | SAMEA3472056_05488 | Not Available | Positive | 5550848 - 5551666 | 31556.7 |
| gntr family transcriptional regulator | SAMEA3472056_05489 | Not Available | Positive | 5551718 - 5552464 | 28250.8 |
| putative carbohydrate/pyrimidine kinase | SAMEA3472056_05490 | Not Available | Negative | 5552438 - 5553403 | 34351.4 |
| putative adp-ribosylglycohydrolase | SAMEA3472056_05491 | Not Available | Negative | 5553400 - 5554404 | 35636.5 |
| major facilitator superfamily protein | SAMEA3472056_05492 | Not Available | Negative | 5554401 - 5555678 | 47379.8 |
| fructose-bisphosphate aldolase | SAMEA3472056_05493 | Not Available | Positive | 5555935 - 5556987 | 38111.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





