Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative molybdate metabolism protein | SAMEA3472056_05473 | Not Available | Negative | 5536740 - 5538029 | 49439.5 |
| methionyl-trna synthetase | SAMEA3472056_05474 | Not Available | Negative | 5538170 - 5540203 | 76244.9 |
| atpase | SAMEA3472056_05475 | Not Available | Positive | 5540335 - 5541444 | 39940.4 |
| fimbrial-like adhesin protein | SAMEA3472056_05476 | Not Available | Positive | 5541707 - 5541988 | 10136.1 |
| fimbrial protein | SAMEA3472056_05477 | Not Available | Positive | 5542282 - 5542824 | 19062.6 |
| putative periplasmic pilin chaperone | SAMEA3472056_05478 | Not Available | Positive | 5542904 - 5543578 | 24820.3 |
| fimbrial outer membrane usher protein | SAMEA3472056_05479 | Not Available | Positive | 5543594 - 5546074 | 92306.1 |
| type-1 fimbrial protein | SAMEA3472056_05480 | Not Available | Positive | 5546085 - 5547119 | 37299.5 |
| periplasmic modulator of ni and co efflux | SAMEA3472056_05481 | Not Available | Negative | 5547201 - 5547539 | 12542.0 |
| nickel/cobalt efflux protein rcna | SAMEA3472056_05482 | Not Available | Negative | 5547758 - 5548582 | 30415.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





