Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit ygcq | SAMEA3472056_05442 | Not Available | Negative | 5497501 - 5498361 | 30358.4 |
| electron transfer flavoprotein subunit ygcr | SAMEA3472056_05443 | Not Available | Negative | 5498358 - 5499137 | 28684.0 |
| major facilitator superfamily protein | SAMEA3472056_05444 | Not Available | Negative | 5499115 - 5500524 | 50777.1 |
| putative fad-binding oxidoreductase | SAMEA3472056_05445 | Not Available | Negative | 5500546 - 5502000 | 53711.5 |
| putative short chain dehydrogenase | SAMEA3472056_05446 | Not Available | Negative | 5502070 - 5502855 | 28104.6 |
| major facilitator superfamily protein | SAMEA3472056_05447 | Not Available | Positive | 5503173 - 5504450 | 46769.4 |
| putative sugar kinase | SAMEA3472056_05448 | Not Available | Positive | 5504477 - 5505955 | 54153.9 |
| 7-carboxy-7-deazaguanine synthase | SAMEA3472056_05449 | Not Available | Negative | 5507814 - 5508485 | 25031.0 |
| lema family protein | SAMEA3472056_05450 | Not Available | Positive | 5508658 - 5509260 | 22672.9 |
| putative glycine rich transmembrane protein | SAMEA3472056_05451 | Not Available | Positive | 5509274 - 5510167 | 32103.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





