Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional prepilin peptidase hopd: leader peptidase | SAMEA3472056_05431 | Not Available | Positive | 5488087 - 5488554 | 17100.2 |
| bacterioferritin | SAMEA3472056_05432 | Not Available | Negative | 5488551 - 5489027 | 18353.1 |
| bacterioferritin-associated ferredoxin | SAMEA3472056_05433 | Not Available | Negative | 5489100 - 5489294 | 7475.27 |
| phosphoadenosine phosphosulfate reductase | SAMEA3472056_05435 | Not Available | Negative | 5490162 - 5490896 | 27976.4 |
| sulfite reductase (nadph) hemoprotein beta subunit | SAMEA3472056_05436 | Not Available | Negative | 5490970 - 5492682 | 63963.8 |
| sulfite reductase (nadph) flavoprotein alpha subunit | SAMEA3472056_05437 | Not Available | Negative | 5492682 - 5494481 | 66338.4 |
| 6-pyruvoyl tetrahydrobiopterin synthase | SAMEA3472056_05438 | Not Available | Positive | 5494797 - 5495162 | 13773.6 |
| putative fad-dependent oxidoreductase | SAMEA3472056_05439 | Not Available | Positive | 5495240 - 5496511 | 46219.6 |
| ferredoxin-like protein ygco | SAMEA3472056_05440 | Not Available | Positive | 5496502 - 5496762 | 9663.5 |
| glycerol antiterminator regulatory protein | SAMEA3472056_05441 | Not Available | Positive | 5496779 - 5497354 | 20787.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





