Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail assembly protein | SAMEA3472056_04958 | Not Available | Positive | 5042487 - 5043035 | 19037.0 |
| Putative tail tip assembly protein | SAMEA3472056_04959 | Not Available | Positive | 5043096 - 5046575 | 127338.0 |
| Attr | Not Available | Not Available | Positive | 5046609 - 5046622 | Not Available |
| Putative lom-like outer membrane protein | SAMEA3472056_04960 | Not Available | Positive | 5046643 - 5047242 | 21819.0 |
| Qin prophage | SAMEA3472056_04961 | Not Available | Positive | 5047307 - 5050138 | 93228.6 |
| Putative portal protein | SAMEA3472056_05494 | Not Available | Positive | 5557237 - 5557953 | 27185.3 |
| Attl | Not Available | Not Available | Positive | 5557732 - 5557743 | Not Available |
| uncharacterised protein | SAMEA3472056_05495 | Not Available | Positive | 5558620 - 5558733 | 4010.05 |
| Replication protein | SAMEA3472056_05496 | Not Available | Negative | 5559036 - 5561312 | 86049.4 |
| Gp83 | SAMEA3472056_05497 | Not Available | Negative | 5561302 - 5561577 | 10168.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





