Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472056_05380 | Not Available | Positive | 5457882 - 5458040 | 6089.0 |
| predicted membrane protein (duf2254) | SAMEA3472056_05381 | Not Available | Positive | 5458000 - 5458413 | 15286.1 |
| putative transposase subunit | SAMEA3472056_05382 | Not Available | Negative | 5458348 - 5459001 | 25289.1 |
| is911 protein | SAMEA3472056_05383 | Not Available | Negative | 5459243 - 5459515 | 10572.0 |
| yjhd | SAMEA3472056_05384 | Not Available | Positive | 5459736 - 5460086 | 12811.5 |
| small predicted membrane protein | SAMEA3472056_05385 | Not Available | Negative | 5460139 - 5460264 | 4779.22 |
| kple2 phage-like element | SAMEA3472056_05386 | Not Available | Negative | 5460307 - 5461425 | 41386.9 |
| kple2 phage-like element transporter | SAMEA3472056_05387 | Not Available | Negative | 5461437 - 5462654 | 44120.1 |
| putative transferase | SAMEA3472056_05388 | Not Available | Positive | 5463674 - 5464228 | 20236.2 |
| transcriptional regulator | SAMEA3472056_05389 | Not Available | Negative | 5464204 - 5464461 | 9993.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





