Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472056_05340 | Not Available | Positive | 5428679 - 5428867 | 7195.66 |
| putative hnh endonuclease | SAMEA3472056_05341 | Not Available | Positive | 5428928 - 5429461 | 20036.3 |
| uncharacterised protein | SAMEA3472056_05342 | Not Available | Positive | 5429576 - 5430184 | 23179.8 |
| uncharacterised protein | SAMEA3472056_05343 | Not Available | Positive | 5430412 - 5430639 | 8650.48 |
| uncharacterised protein | SAMEA3472056_05344 | Not Available | Positive | 5430819 - 5431139 | 11922.1 |
| aec78 | SAMEA3472056_05345 | Not Available | Positive | 5431655 - 5431966 | 11543.8 |
| protein of uncharacterised function (duf3085) | SAMEA3472056_05346 | Not Available | Positive | 5431971 - 5432339 | 13338.9 |
| putative transposase | SAMEA3472056_05347 | Not Available | Negative | 5432350 - 5433147 | 30531.2 |
| is21 family transposase | SAMEA3472056_05348 | Not Available | Negative | 5433147 - 5434319 | 45855.9 |
| uncharacterised protein | SAMEA3472056_05349 | Not Available | Positive | 5434385 - 5434501 | 4186.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





