Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | SAMEA3472056_05330 | Not Available | Positive | 5420224 - 5420832 | 22847.1 |
| putative dna methyltransferase | SAMEA3472056_05331 | Not Available | Positive | 5421001 - 5422251 | 46856.9 |
| uncharacterised protein | SAMEA3472056_05332 | Not Available | Positive | 5422532 - 5422678 | 5179.33 |
| putative dna methyltransferase | SAMEA3472056_05333 | Not Available | Positive | 5423094 - 5423420 | 12136.3 |
| uncharacterised protein | SAMEA3472056_05334 | Not Available | Positive | 5423486 - 5423743 | 9282.68 |
| uncharacterised protein | SAMEA3472056_05335 | Not Available | Positive | 5423970 - 5424761 | 28829.9 |
| uncharacterised protein | SAMEA3472056_05336 | Not Available | Positive | 5424813 - 5425262 | 17142.4 |
| predicted phosphoadenosine phosphosulfate sulfotransferase | SAMEA3472056_05337 | Not Available | Positive | 5425435 - 5427819 | 90160.1 |
| uncharacterised protein | SAMEA3472056_05338 | Not Available | Positive | 5428069 - 5428308 | 8648.08 |
| uncharacterised protein | SAMEA3472056_05339 | Not Available | Positive | 5428371 - 5428682 | 11967.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





