Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein c | SAMEA3472056_05308 | Not Available | Negative | 5396814 - 5397245 | 16997.1 |
| dna-directed rna polymerase subunit beta | SAMEA3472056_05309 | Not Available | Negative | 5397458 - 5401681 | 155169.0 |
| dna-directed rna polymerase subunit beta | SAMEA3472056_05310 | Not Available | Negative | 5401758 - 5405786 | 150641.0 |
| 50s ribosomal protein l7/l12 | SAMEA3472056_05312 | Not Available | Negative | 5406106 - 5406471 | 12295.8 |
| 50s ribosomal protein l10 | SAMEA3472056_05313 | Not Available | Negative | 5406538 - 5407035 | 17712.6 |
| 50s ribosomal protein l1 | SAMEA3472056_05314 | Not Available | Negative | 5407327 - 5408031 | 24731.1 |
| 50s ribosomal protein l11 | SAMEA3472056_05315 | Not Available | Negative | 5408035 - 5408463 | 14876.2 |
| transcription antitermination protein nusg | SAMEA3472056_05316 | Not Available | Negative | 5408622 - 5409167 | 20532.7 |
| preprotein translocase subunit sece | SAMEA3472056_05317 | Not Available | Negative | 5409169 - 5409552 | 13644.3 |
| putative transposase | SAMEA3472056_05318 | Not Available | Positive | 5410266 - 5410898 | 24660.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





