Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| htdz | SAMEA3472056_05245 | Not Available | Positive | 5333376 - 5333729 | 12331.5 |
| trhl | SAMEA3472056_05246 | Not Available | Positive | 5333837 - 5334097 | 9896.27 |
| trhe | SAMEA3472056_05247 | Not Available | Positive | 5334109 - 5334897 | 29314.2 |
| trhk | SAMEA3472056_05248 | Not Available | Positive | 5334897 - 5336168 | 45264.5 |
| htdo | SAMEA3472056_05249 | Not Available | Positive | 5336170 - 5336631 | 17219.4 |
| putative plasmid transfer protein | SAMEA3472056_05250 | Not Available | Positive | 5336621 - 5337976 | 48515.8 |
| htdv | SAMEA3472056_05251 | Not Available | Positive | 5337984 - 5338466 | 18772.5 |
| htdt | SAMEA3472056_05252 | Not Available | Positive | 5338480 - 5339337 | 31588.4 |
| trhv | SAMEA3472056_05253 | Not Available | Positive | 5339347 - 5340297 | 33901.1 |
| trhc | SAMEA3472056_05254 | Not Available | Positive | 5340306 - 5342987 | 101519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





