Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472056_05235 | Not Available | Negative | 5323334 - 5323510 | 6646.55 |
| dna restriction methylase | SAMEA3472056_05236 | Not Available | Negative | 5323507 - 5325198 | 63321.5 |
| dna-binding plasmid partitioning protein | SAMEA3472056_05237 | Not Available | Negative | 5325446 - 5326609 | 43204.6 |
| dna adenine methylase | SAMEA3472056_05238 | Not Available | Positive | 5327018 - 5327791 | 29250.7 |
| uncharacterised protein | SAMEA3472056_05239 | Not Available | Negative | 5327800 - 5328654 | 32645.6 |
| uncharacterised protein | SAMEA3472056_05240 | Not Available | Negative | 5328889 - 5329605 | 26898.1 |
| uncharacterised protein | SAMEA3472056_05241 | Not Available | Negative | 5329602 - 5329802 | 7863.54 |
| putative dna-binding protein | SAMEA3472056_05242 | Not Available | Negative | 5329820 - 5330875 | 39482.0 |
| replication initiation protein repa | SAMEA3472056_05243 | Not Available | Positive | 5331352 - 5332227 | 33238.4 |
| uncharacterised protein | SAMEA3472056_05244 | Not Available | Positive | 5332653 - 5332853 | 7681.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





