Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine-specific dna methylase | SAMEA3472056_05225 | Not Available | Positive | 5310139 - 5310900 | 28255.2 |
| uncharacterised protein | SAMEA3472056_05226 | Not Available | Positive | 5310994 - 5311257 | 9924.71 |
| uncharacterised protein | SAMEA3472056_05227 | Not Available | Positive | 5311302 - 5311889 | 21973.2 |
| putative periplasmic protein | SAMEA3472056_05228 | Not Available | Positive | 5312354 - 5314774 | 88572.3 |
| uncharacterised protein | SAMEA3472056_05229 | Not Available | Negative | 5315800 - 5316456 | 25019.7 |
| reph12 | SAMEA3472056_05230 | Not Available | Negative | 5316853 - 5317941 | 41032.9 |
| putative periplasmic protein | SAMEA3472056_05231 | Not Available | Negative | 5319049 - 5321505 | 89985.8 |
| uncharacterised protein | SAMEA3472056_05232 | Not Available | Positive | 5321878 - 5322504 | 22998.3 |
| uncharacterised protein | SAMEA3472056_05233 | Not Available | Negative | 5322562 - 5322843 | 10340.2 |
| uncharacterised protein | SAMEA3472056_05234 | Not Available | Negative | 5322824 - 5323285 | 17336.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





