Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein papg | SAMEA3472056_05214 | Not Available | Negative | 5303090 - 5304100 | 37496.6 |
| minor pilin subunit papf | SAMEA3472056_05215 | Not Available | Negative | 5304144 - 5304644 | 17691.2 |
| pape protein | SAMEA3472056_05216 | Not Available | Negative | 5304719 - 5305240 | 18570.4 |
| papk protein | SAMEA3472056_05217 | Not Available | Negative | 5305267 - 5305803 | 18842.5 |
| protein papj | SAMEA3472056_05218 | Not Available | Negative | 5305813 - 5306394 | 20765.9 |
| chaperone protein papd | SAMEA3472056_05219 | Not Available | Negative | 5306431 - 5307150 | 26804.3 |
| uncharacterised protein | SAMEA3472056_05221 | Not Available | Negative | 5307664 - 5307921 | 9400.09 |
| uncharacterised protein | SAMEA3472056_05222 | Not Available | Negative | 5307908 - 5308345 | 16258.0 |
| uncharacterised protein | SAMEA3472056_05223 | Not Available | Negative | 5308449 - 5308973 | 19445.3 |
| uncharacterised protein | SAMEA3472056_05224 | Not Available | Positive | 5309294 - 5310058 | 28220.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





