Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase c | SAMEA3472056_05204 | Not Available | Positive | 5288765 - 5289844 | 40114.8 |
| nucleoside permease | SAMEA3472056_05205 | Not Available | Positive | 5290046 - 5291302 | 46392.0 |
| ornithine decarboxylase | SAMEA3472056_05206 | Not Available | Negative | 5291352 - 5293487 | 79549.6 |
| membrane protein yqga | SAMEA3472056_05207 | Not Available | Positive | 5293886 - 5294593 | 24661.6 |
| Trna-phe | Not Available | Not Available | Positive | 5294699 - 5294774 | Not Available |
| integrase | SAMEA3472056_05209 | Not Available | Positive | 5294972 - 5296234 | 47779.8 |
| uncharacterised protein | SAMEA3472056_05210 | Not Available | Positive | 5296394 - 5296546 | 5870.27 |
| superfamily i dna helicase | SAMEA3472056_05211 | Not Available | Positive | 5296686 - 5300201 | 131599.0 |
| putative membrane-associated, metal-dependent hydrolase | SAMEA3472056_05212 | Not Available | Negative | 5300310 - 5301809 | 55938.5 |
| tia invasion determinant | SAMEA3472056_05213 | Not Available | Negative | 5301984 - 5302730 | 27526.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





