Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose-proton symporter | SAMEA3472056_05184 | Not Available | Positive | 5272528 - 5273922 | 50985.6 |
| protein sprt | SAMEA3472056_05185 | Not Available | Positive | 5274041 - 5274496 | 17811.6 |
| endonuclease i | SAMEA3472056_05186 | Not Available | Positive | 5274591 - 5275298 | 26667.4 |
| 16s ribosomal rna methyltransferase rsme | SAMEA3472056_05187 | Not Available | Positive | 5275378 - 5276109 | 26979.7 |
| glutathione synthetase | SAMEA3472056_05188 | Not Available | Positive | 5276122 - 5277072 | 35563.0 |
| protein yqge | SAMEA3472056_05189 | Not Available | Positive | 5277109 - 5277744 | 23333.4 |
| putative holliday junction resolvase | SAMEA3472056_05190 | Not Available | Positive | 5277744 - 5278160 | 15286.3 |
| twitching motility family protein | SAMEA3472056_05191 | Not Available | Negative | 5278344 - 5279324 | 35944.3 |
| putative amino acid racemase | SAMEA3472056_05192 | Not Available | Positive | 5279342 - 5280046 | 25778.9 |
| membrane protein yggt | SAMEA3472056_05193 | Not Available | Positive | 5280064 - 5280630 | 21168.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





