Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impa domain-containing protein | SAMEA3472056_05164 | Not Available | Negative | 5245322 - 5246734 | 52177.9 |
| type vi secretion-associated protein | SAMEA3472056_05165 | Not Available | Negative | 5246739 - 5247482 | 26435.7 |
| atp-dependent chaperone protein clpb | SAMEA3472056_05166 | Not Available | Negative | 5247479 - 5248528 | 38267.4 |
| atp-dependent chaperone protein clpb | SAMEA3472056_05167 | Not Available | Negative | 5248658 - 5250238 | 57774.4 |
| membrane protein aec26 | SAMEA3472056_05168 | Not Available | Negative | 5250247 - 5251008 | 29390.8 |
| type vi secretion protein | SAMEA3472056_05169 | Not Available | Negative | 5251013 - 5252344 | 49944.8 |
| type vi secretion lipoprotein | SAMEA3472056_05170 | Not Available | Negative | 5252347 - 5252871 | 19428.1 |
| type vi secretion system protein impi | SAMEA3472056_05171 | Not Available | Negative | 5252868 - 5254148 | 47349.7 |
| type vi secretion protein | SAMEA3472056_05172 | Not Available | Negative | 5254255 - 5255232 | 36490.6 |
| type vi secretion system protein impg | SAMEA3472056_05173 | Not Available | Negative | 5255196 - 5257046 | 71037.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





