Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication protein | SAMEA3472056_05142 | Not Available | Positive | 5226663 - 5226920 | 9631.57 |
| replication protein of incfii family | SAMEA3472056_05144 | Not Available | Positive | 5227221 - 5228078 | 32817.7 |
| Trna-asp | Not Available | Not Available | Positive | 5228676 - 5228752 | Not Available |
| 2,5-diketo-d-gluconic acid reductase b | SAMEA3472056_05147 | Not Available | Positive | 5228915 - 5229718 | 29439.4 |
| lysr family transcriptional regulator | SAMEA3472056_05148 | Not Available | Negative | 5229715 - 5230629 | 33696.6 |
| endonuclease/exonuclease/phosphatase family protein | SAMEA3472056_05149 | Not Available | Positive | 5230891 - 5231670 | 29128.3 |
| putative methyltransferase | SAMEA3472056_05150 | Not Available | Positive | 5231748 - 5232518 | 28354.5 |
| membrane-bound lytic murein transglycosylase d | SAMEA3472056_05151 | Not Available | Negative | 5232566 - 5233786 | 44680.6 |
| hydroxyacylglutathione hydrolase | SAMEA3472056_05152 | Not Available | Negative | 5233996 - 5234751 | 28391.9 |
| s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3472056_05153 | Not Available | Positive | 5234785 - 5235507 | 27265.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





