Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bacteriophage antiterminator protein q | SAMEA3472056_04928 | Not Available | Positive | 5024070 - 5024759 | 26407.7 |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 5024954 - 5025029 | Not Available |
| Trna,type:lys,anti_codon:ttt; | Not Available | Not Available | Positive | 5025031 - 5025107 | Not Available |
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 5025110 - 5025185 | Not Available |
| Trna,type:gly,anti_codon:tcc; | Not Available | Not Available | Positive | 5025189 - 5025263 | Not Available |
| Putative holin | SAMEA3472056_04933 | Not Available | Positive | 5025556 - 5025771 | 7865.48 |
| Hypothetical protein | SAMEA3472056_04934 | Not Available | Positive | 5025776 - 5026090 | 11706.9 |
| Endolysin | SAMEA3472056_04935 | Not Available | Positive | 5026146 - 5026679 | 19455.4 |
| Lysin | SAMEA3472056_04936 | Not Available | Positive | 5026676 - 5027143 | 17456.9 |
| uncharacterised protein | SAMEA3472056_04937 | Not Available | Negative | 5027322 - 5027807 | 17643.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





