Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trai | SAMEA3472056_05061 | Not Available | Negative | 5155039 - 5156433 | 50325.2 |
| conjugal transfer protein trbh | SAMEA3472056_05062 | Not Available | Negative | 5156437 - 5156880 | 15715.9 |
| conjugal transfer protein trbg | SAMEA3472056_05063 | Not Available | Negative | 5156883 - 5157773 | 32191.5 |
| conjugal transfer protein trbf | SAMEA3472056_05064 | Not Available | Negative | 5157789 - 5158496 | 26853.1 |
| putative pilx3-4/virb3-4 protein, putative conjugal transfer protein | SAMEA3472056_05065 | Not Available | Negative | 5158493 - 5161036 | 95133.8 |
| conjugal transfer protein trbd | SAMEA3472056_05066 | Not Available | Negative | 5161033 - 5161359 | 12454.7 |
| conjugal transfer protein trbc | SAMEA3472056_05067 | Not Available | Negative | 5161362 - 5161745 | 13078.2 |
| p-type dna transfer atpase virb11 | SAMEA3472056_05068 | Not Available | Negative | 5161859 - 5162815 | 35390.1 |
| transcriptional regulator | SAMEA3472056_05069 | Not Available | Negative | 5162998 - 5163402 | 15238.6 |
| single-stranded dna-binding protein | SAMEA3472056_05070 | Not Available | Positive | 5163507 - 5163881 | 13881.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





