Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyltransferase (glycine cleavage system protein) | SAMEA3472056_05041 | Not Available | Positive | 5137347 - 5138441 | 40151.0 |
| glycine cleavage system protein h | SAMEA3472056_05042 | Not Available | Positive | 5138465 - 5138854 | 13811.8 |
| glycine dehydrogenase | SAMEA3472056_05043 | Not Available | Positive | 5138973 - 5141846 | 104393.0 |
| 6-phospho-beta-glucosidase | SAMEA3472056_05044 | Not Available | Negative | 5142010 - 5143443 | 55076.3 |
| putative cytoplasmic protein | SAMEA3472056_05045 | Not Available | Positive | 5143488 - 5143799 | 11906.0 |
| hemolysin (membrane protein) | SAMEA3472056_05046 | Not Available | Positive | 5143963 - 5144622 | 23862.2 |
| dna primase sogl | SAMEA3472056_05047 | Not Available | Positive | 5144833 - 5145900 | 39194.8 |
| uncharacterised protein | SAMEA3472056_05048 | Not Available | Positive | 5145996 - 5146487 | 17706.6 |
| hemolysin expression-modulating protein | SAMEA3472056_05049 | Not Available | Positive | 5146520 - 5146699 | 7162.49 |
| uncharacterised protein | SAMEA3472056_05050 | Not Available | Negative | 5146756 - 5147742 | 38122.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





