Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase fe-s binding subunit | SAMEA3472056_04989 | Not Available | Negative | 5085098 - 5087017 | 69077.8 |
| purine permease ygfu | SAMEA3472056_04990 | Not Available | Positive | 5087453 - 5088901 | 51761.4 |
| small predicted membrane protein | SAMEA3472056_04991 | Not Available | Positive | 5088903 - 5089028 | 4757.28 |
| isopentenyl-diphosphate delta-isomerase | SAMEA3472056_04992 | Not Available | Positive | 5089151 - 5089699 | 20563.4 |
| lysyl-trna synthetase | SAMEA3472056_04993 | Not Available | Negative | 5089742 - 5091259 | 57620.8 |
| peptide chain release factor 2 | SAMEA3472056_04994 | Not Available | Negative | 5091269 - 5092150 | 32850.3 |
| single-stranded dna-specific exonuclease | SAMEA3472056_04995 | Not Available | Negative | 5092458 - 5094191 | 63370.5 |
| thiol:disulfide interchange protein | SAMEA3472056_04996 | Not Available | Negative | 5094197 - 5094907 | 25639.1 |
| tyrosine recombinase | SAMEA3472056_04997 | Not Available | Negative | 5094932 - 5095828 | 34264.5 |
| flavodoxin ii | SAMEA3472056_04998 | Not Available | Positive | 5095940 - 5096461 | 19701.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





