Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase subunit xdha | SAMEA3472056_04969 | Not Available | Positive | 5056392 - 5058689 | 82703.1 |
| xanthine dehydrogenase fad-binding subunit | SAMEA3472056_04970 | Not Available | Positive | 5058700 - 5059578 | 31558.6 |
| xanthine dehydrogenase iron-sulfur-binding subunit | SAMEA3472056_04971 | Not Available | Positive | 5059575 - 5060054 | 16922.7 |
| transcriptional regulator | SAMEA3472056_04972 | Not Available | Negative | 5060094 - 5061872 | 66114.0 |
| putative aspartate/ornithine carbamoyltransferase | SAMEA3472056_04973 | Not Available | Positive | 5062351 - 5063538 | 44057.7 |
| putative diaminopropionate ammonia-lyase | SAMEA3472056_04974 | Not Available | Positive | 5063596 - 5064792 | 43330.1 |
| putative peptidase | SAMEA3472056_04975 | Not Available | Positive | 5064850 - 5066061 | 44806.4 |
| phenylhydantoinase | SAMEA3472056_04976 | Not Available | Positive | 5066114 - 5067499 | 51046.2 |
| carbamate kinase | SAMEA3472056_04977 | Not Available | Positive | 5067547 - 5068479 | 33087.0 |
| nad(p)-binding rossman fold | SAMEA3472056_04978 | Not Available | Negative | 5068700 - 5070325 | 57685.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





