Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 4993153 - 4993228 | Not Available |
| nitrogen assimilation regulatory protein nac | SAMEA3472056_04895 | Not Available | Positive | 4993555 - 4994472 | 32837.0 |
| lysr family transcriptional regulator | SAMEA3472056_04896 | Not Available | Positive | 4994574 - 4995524 | 35858.0 |
| Trna-asn | Not Available | Not Available | Positive | 4995562 - 4995637 | Not Available |
| multidrug efflux system | SAMEA3472056_04898 | Not Available | Positive | 4995798 - 4997285 | 54173.8 |
| Trna-asn | Not Available | Not Available | Positive | 4997386 - 4997461 | Not Available |
| putative cytoplasmic protein | SAMEA3472056_04900 | Not Available | Negative | 4997913 - 4998629 | 25854.5 |
| amp nucleosidase | SAMEA3472056_04901 | Not Available | Negative | 4998972 - 5000426 | 54011.9 |
| shikimate transporter | SAMEA3472056_04902 | Not Available | Negative | 5000528 - 5001844 | 47790.2 |
| adp-heptose--lps heptosyltransferase-like protein | SAMEA3472056_04903 | Not Available | Positive | 5002159 - 5003211 | 39515.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





