Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus assembly protein trae | SAMEA3472056_04832 | Not Available | Negative | 4941637 - 4942215 | 21943.5 |
| conjugal transfer pilus assembly protein tral | SAMEA3472056_04833 | Not Available | Negative | 4942226 - 4942525 | 11505.2 |
| putative traa protein | SAMEA3472056_04834 | Not Available | Negative | 4942556 - 4942927 | 13321.8 |
| uncharacterised protein | SAMEA3472056_04835 | Not Available | Negative | 4943514 - 4944278 | 29820.2 |
| conjugal transfer protein tram | SAMEA3472056_04836 | Not Available | Negative | 4944439 - 4944834 | 15414.5 |
| putative transglycosylase | SAMEA3472056_04837 | Not Available | Positive | 4945347 - 4945799 | 17359.9 |
| uncharacterised protein | SAMEA3472056_04838 | Not Available | Positive | 4945803 - 4945916 | 4334.1 |
| yubp | SAMEA3472056_04839 | Not Available | Negative | 4946078 - 4946899 | 31692.8 |
| uncharacterised protein | SAMEA3472056_04840 | Not Available | Negative | 4947005 - 4947301 | 10709.7 |
| yubn | SAMEA3472056_04841 | Not Available | Positive | 4947364 - 4947954 | 21326.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





