Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of cell morphogenesis and no signaling | SAMEA3472056_04791 | Not Available | Positive | 4899072 - 4899734 | 24870.0 |
| d-serine/d-alanine/glycine transporter | SAMEA3472056_04792 | Not Available | Negative | 4899779 - 4901191 | 51662.6 |
| fkbp-type 22 kda peptidyl-prolyl cis-trans isomerase | SAMEA3472056_04793 | Not Available | Negative | 4901500 - 4902120 | 22217.5 |
| cell envelope opacity-associated protein | SAMEA3472056_04794 | Not Available | Positive | 4902338 - 4902976 | 23506.9 |
| transposase | SAMEA3472056_04795 | Not Available | Negative | 4903111 - 4904259 | 43233.0 |
| transposase | SAMEA3472056_04796 | Not Available | Positive | 4904327 - 4904614 | 11137.7 |
| putative phosphatidate cytidylyltransferase | SAMEA3472056_04797 | Not Available | Negative | 4905593 - 4905877 | 10910.4 |
| putative plasmid stabilisation system protein | SAMEA3472056_04798 | Not Available | Negative | 4906037 - 4906336 | 11517.5 |
| putative plasmid stabilisation system protein | SAMEA3472056_04799 | Not Available | Negative | 4906326 - 4906589 | 9927.7 |
| replication initiation protein | SAMEA3472056_04800 | Not Available | Negative | 4907591 - 4908613 | 40206.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





