Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha helix protein | SAMEA3472056_04770 | Not Available | Positive | 4874945 - 4875496 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | SAMEA3472056_04771 | Not Available | Negative | 4875652 - 4877025 | 49882.0 |
| fructose-1,6-bisphosphatase | SAMEA3472056_04772 | Not Available | Positive | 4877201 - 4878199 | 36836.0 |
| abc transporter permease | SAMEA3472056_04773 | Not Available | Negative | 4878232 - 4879227 | 35008.0 |
| abc transporter permease | SAMEA3472056_04774 | Not Available | Negative | 4879214 - 4880236 | 35514.1 |
| sugar transport system atp-binding protein | SAMEA3472056_04775 | Not Available | Negative | 4880250 - 4881752 | 55262.4 |
| abc transporter substrate-binding protein | SAMEA3472056_04776 | Not Available | Negative | 4881892 - 4882848 | 34314.5 |
| inorganic pyrophosphatase | SAMEA3472056_04777 | Not Available | Positive | 4883158 - 4883688 | 19732.6 |
| aig2 family protein | SAMEA3472056_04778 | Not Available | Negative | 4884068 - 4884409 | 12867.2 |
| translocation and assembly module for autotransporter export, inner membrane subunit | SAMEA3472056_04779 | Not Available | Negative | 4884412 - 4888191 | 136841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





