Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase regulatory subunit | SAMEA3472056_04759 | Not Available | Positive | 4861337 - 4861798 | 17121.6 |
| endoribonuclease l-psp | SAMEA3472056_04760 | Not Available | Positive | 4861871 - 4862257 | 13612.3 |
| mg(2+) transport atpase, p-type | SAMEA3472056_04761 | Not Available | Negative | 4862463 - 4865159 | 99472.3 |
| trehalose operon repressor | SAMEA3472056_04763 | Not Available | Positive | 4865538 - 4866485 | 34589.9 |
| trehalose-specific pts system eiibc component | SAMEA3472056_04764 | Not Available | Positive | 4866604 - 4868025 | 51090.9 |
| trehalose-6-phosphate hydrolase | SAMEA3472056_04765 | Not Available | Positive | 4868075 - 4869730 | 63833.0 |
| anaerobic ribonucleoside-triphosphate reductase | SAMEA3472056_04766 | Not Available | Positive | 4870124 - 4872262 | 79999.9 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | SAMEA3472056_04767 | Not Available | Positive | 4872420 - 4872884 | 17490.9 |
| soluble cytochrome b562 | SAMEA3472056_04768 | Not Available | Negative | 4872929 - 4873315 | 14034.7 |
| putative modulator of dna gyrase | SAMEA3472056_04769 | Not Available | Negative | 4873498 - 4874850 | 48372.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





