Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shia-like protein | SAMEA3472056_04728 | Not Available | Positive | 4824903 - 4825946 | 40224.6 |
| transcriptional regulator | SAMEA3472056_04729 | Not Available | Negative | 4826344 - 4827414 | 40039.8 |
| ybl163 | SAMEA3472056_04730 | Not Available | Positive | 4827676 - 4828977 | 47751.2 |
| aec37 | SAMEA3472056_04731 | Not Available | Positive | 4828992 - 4831373 | 92040.3 |
| putative membrane-associated, metal-dependent hydrolase | SAMEA3472056_04733 | Not Available | Positive | 4833812 - 4834243 | 15663.2 |
| phage integrase family site specific recombinase | SAMEA3472056_04734 | Not Available | Negative | 4835010 - 4836200 | 45615.0 |
| su+6 (supp) amber suppressor transfer rna-leu | SAMEA3472056_04735 | Not Available | Negative | 4836229 - 4836423 | 6930.18 |
| Trna-leu | Not Available | Not Available | Positive | 4836461 - 4836545 | Not Available |
| oxidoreductase | SAMEA3472056_04737 | Not Available | Positive | 4836741 - 4837760 | 36519.9 |
| d-gluconate kinase | SAMEA3472056_04738 | Not Available | Negative | 4837764 - 4838327 | 21005.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





