Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SAMEA3472056_04718 | Not Available | Positive | 4809095 - 4811203 | 79347.1 |
| trna (guanosine-2'-o)-methyltransferase | SAMEA3472056_04719 | Not Available | Positive | 4811210 - 4811899 | 25360.6 |
| atp-dependent dna helicase recg | SAMEA3472056_04720 | Not Available | Positive | 4811905 - 4813986 | 76510.2 |
| sodium/glutamate symport carrier protein (glutamate permease) | SAMEA3472056_04721 | Not Available | Negative | 4814152 - 4815357 | 42408.8 |
| purine permease yice | SAMEA3472056_04722 | Not Available | Positive | 4815637 - 4817028 | 48870.3 |
| asma family protein | SAMEA3472056_04723 | Not Available | Positive | 4817149 - 4818858 | 62234.8 |
| putative glycosyl hydrolase | SAMEA3472056_04724 | Not Available | Negative | 4818911 - 4821229 | 88057.9 |
| putative carbohydrate transporter | SAMEA3472056_04725 | Not Available | Negative | 4821239 - 4822621 | 50951.4 |
| Trna-sec(p) | Not Available | Not Available | Positive | 4822914 - 4823004 | Not Available |
| integrase | SAMEA3472056_04727 | Not Available | Positive | 4823308 - 4824492 | 45450.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





