Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMEA3472056_04708 | Not Available | Positive | 4800621 - 4801079 | 16288.7 |
| nucleoid occlusion protein | SAMEA3472056_04709 | Not Available | Positive | 4801186 - 4801782 | 22837.7 |
| orotate phosphoribosyltransferase | SAMEA3472056_04710 | Not Available | Negative | 4801819 - 4802460 | 23568.3 |
| ribonuclease ph | SAMEA3472056_04711 | Not Available | Negative | 4802525 - 4803241 | 25313.4 |
| putative alpha helix protein | SAMEA3472056_04712 | Not Available | Positive | 4803368 - 4804231 | 33176.9 |
| dna-damage-inducible protein d | SAMEA3472056_04713 | Not Available | Positive | 4804453 - 4805277 | 30985.8 |
| inner membrane protein | SAMEA3472056_04714 | Not Available | Positive | 4805569 - 4806186 | 22049.8 |
| nad-dependent dna ligase ligb | SAMEA3472056_04715 | Not Available | Negative | 4806183 - 4807865 | 63256.9 |
| guanylate kinase | SAMEA3472056_04716 | Not Available | Positive | 4808123 - 4808746 | 23594.1 |
| rna polymerase omega subunit | SAMEA3472056_04717 | Not Available | Positive | 4808801 - 4809076 | 10237.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





