Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kinase that phosphorylates core heptose of lipopolysaccharide | SAMEA3472056_04697 | Not Available | Negative | 4791844 - 4792641 | 30970.2 |
| glucosyltransferase i | SAMEA3472056_04698 | Not Available | Negative | 4792634 - 4793758 | 42314.5 |
| lipopolysaccharide heptosyltransferase iii | SAMEA3472056_04699 | Not Available | Negative | 4793755 - 4794825 | 40215.8 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMEA3472056_04701 | Not Available | Positive | 4795232 - 4796509 | 47355.9 |
| phosphopantetheine adenylyltransferase | SAMEA3472056_04702 | Not Available | Positive | 4796517 - 4796996 | 17881.7 |
| formamidopyrimidine-dna glycosylase | SAMEA3472056_04703 | Not Available | Negative | 4797035 - 4797844 | 30288.8 |
| 50s ribosomal protein l33 | SAMEA3472056_04704 | Not Available | Negative | 4797942 - 4798109 | 6371.94 |
| 50s ribosomal protein l28 | SAMEA3472056_04705 | Not Available | Negative | 4798130 - 4798366 | 9007.02 |
| dna repair protein radc | SAMEA3472056_04706 | Not Available | Negative | 4798583 - 4799251 | 25275.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase | SAMEA3472056_04707 | Not Available | Positive | 4799423 - 4800643 | 43440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





