Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-heptose--lps-heptosyltransferase ii | SAMEA3472056_04687 | Not Available | Positive | 4781431 - 4782477 | 39046.4 |
| lipopolysaccharide heptosyltransferase 1 | SAMEA3472056_04688 | Not Available | Positive | 4782481 - 4783437 | 35399.5 |
| lipid a-core: surface polymer ligase | SAMEA3472056_04689 | Not Available | Positive | 4783476 - 4784693 | 46054.4 |
| lipopolysaccharide 1,2-n-acetylglucosamine transferase | SAMEA3472056_04690 | Not Available | Negative | 4784747 - 4785889 | 42851.8 |
| lipopolysaccharide core biosynthesis protein | SAMEA3472056_04691 | Not Available | Negative | 4785942 - 4786751 | 31431.0 |
| lipopolysaccharide core biosynthesis protein | SAMEA3472056_04692 | Not Available | Negative | 4786823 - 4787521 | 27486.5 |
| udp-d-glucose:(galactosyl)lipopolysaccharide glucosyltransferase | SAMEA3472056_04693 | Not Available | Negative | 4787539 - 4788555 | 39493.8 |
| udp-d-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-d-galactosyltransferase | SAMEA3472056_04694 | Not Available | Negative | 4788719 - 4789738 | 39447.3 |
| udp-d-galactose:(glucosyl)lipopolysaccharide-1, 6-d-galactosyltransferase | SAMEA3472056_04695 | Not Available | Negative | 4789738 - 4790817 | 40630.2 |
| udp-galactose:(glucosyl) lps alpha-1,3-galactosyltransferase | SAMEA3472056_04696 | Not Available | Negative | 4790831 - 4791811 | 38222.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





