Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit secb | SAMEA3472056_04677 | Not Available | Negative | 4771267 - 4771734 | 17278.3 |
| glutaredoxin 3 | SAMEA3472056_04678 | Not Available | Negative | 4771797 - 4772048 | 9138.01 |
| putative rhodanase-like exported protein | SAMEA3472056_04679 | Not Available | Negative | 4772190 - 4772621 | 15597.2 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | SAMEA3472056_04680 | Not Available | Positive | 4772866 - 4774410 | 56126.9 |
| membrane protein yibp | SAMEA3472056_04681 | Not Available | Positive | 4774444 - 4775703 | 46597.4 |
| putative polysaccharide deacetylase | SAMEA3472056_04682 | Not Available | Positive | 4775707 - 4776666 | 35370.8 |
| putative glycosyl transferase | SAMEA3472056_04683 | Not Available | Negative | 4776653 - 4777687 | 40500.6 |
| threonine 3-dehydrogenase nad(p)-binding protein | SAMEA3472056_04684 | Not Available | Negative | 4777926 - 4778951 | 37287.2 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMEA3472056_04685 | Not Available | Negative | 4778961 - 4780157 | 43078.5 |
| adp-glyceromanno-heptose 6-epimerase rfad | SAMEA3472056_04686 | Not Available | Positive | 4780371 - 4781351 | 36575.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





