Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative rna 2'-o-ribose methyltransferase | SAMEA3472056_04636 | Not Available | Positive | 4725957 - 4727057 | 41907.5 |
| fucr family transcriptional regulator | SAMEA3472056_04637 | Not Available | Negative | 4727101 - 4727832 | 27349.7 |
| putative fuscose transport/metabolism protein | SAMEA3472056_04638 | Not Available | Negative | 4727890 - 4728312 | 15474.0 |
| l-fuculokinase | SAMEA3472056_04639 | Not Available | Negative | 4728314 - 4729732 | 52247.6 |
| l-fucose isomerase | SAMEA3472056_04640 | Not Available | Negative | 4729953 - 4731602 | 60586.0 |
| l-fucose permease | SAMEA3472056_04641 | Not Available | Negative | 4731635 - 4732951 | 47547.6 |
| l-fuculose phosphate aldolase | SAMEA3472056_04642 | Not Available | Positive | 4733498 - 4734145 | 23786.7 |
| lactaldehyde reductase (propanediol oxidoreductase) | SAMEA3472056_04643 | Not Available | Positive | 4734173 - 4735321 | 40494.8 |
| 5'-3' exonuclease | SAMEA3472056_04644 | Not Available | Negative | 4735376 - 4736221 | 31500.9 |
| l-serine dehydratase 2 | SAMEA3472056_04645 | Not Available | Negative | 4736243 - 4737610 | 48725.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





