Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| qin prophage protein | SAMEA3472056_04535 | Not Available | Positive | 4627565 - 4627897 | 12208.4 |
| putative integrase/transposase | SAMEA3472056_04536 | Not Available | Negative | 4628334 - 4629647 | 50783.7 |
| membrane protein | SAMEA3472056_04538 | Not Available | Negative | 4629982 - 4630161 | 7011.01 |
| Methyltransferase | SAMEA3472056_04539 | Not Available | Negative | 4631314 - 4631670 | 13620.4 |
| Lygf | SAMEA3472056_04540 | Not Available | Negative | 4631667 - 4632089 | 16256.5 |
| Replication protein | SAMEA3472056_04541 | Not Available | Negative | 4632130 - 4633095 | 36962.9 |
| ydfx | SAMEA3472056_04542 | Not Available | Negative | 4633076 - 4633597 | 19925.9 |
| Putative cro anti-repressor | SAMEA3472056_04543 | Not Available | Negative | 4633581 - 4633811 | 8578.22 |
| Putative transcriptional repressor dica | SAMEA3472056_04544 | Not Available | Positive | 4633895 - 4634302 | 15656.9 |
| Hypothetical protein | SAMEA3472056_04545 | Not Available | Positive | 4634469 - 4634624 | 5792.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





