Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase-dependent protein a | SAMEA3472056_04615 | Not Available | Positive | 4703025 - 4703495 | 17906.5 |
| prepilin peptidase dependent protein b | SAMEA3472056_04616 | Not Available | Positive | 4703486 - 4704049 | 20520.7 |
| protein | SAMEA3472056_04617 | Not Available | Positive | 4704046 - 4704453 | 14772.9 |
| prepilin peptidase-dependent protein c | SAMEA3472056_04618 | Not Available | Positive | 4704438 - 4704761 | 12004.7 |
| exodeoxyribonuclease v gamma subunit | SAMEA3472056_04619 | Not Available | Positive | 4704774 - 4708142 | 128856.0 |
| protease iii | SAMEA3472056_04620 | Not Available | Positive | 4708318 - 4711206 | 107854.0 |
| exonuclease v subunit beta | SAMEA3472056_04621 | Not Available | Positive | 4711199 - 4714741 | 134015.0 |
| exodeoxyribonuclease v subunit alpha | SAMEA3472056_04622 | Not Available | Positive | 4714741 - 4716567 | 66913.3 |
| amino acid acetyltransferase | SAMEA3472056_04623 | Not Available | Negative | 4716629 - 4717960 | 49198.1 |
| n-acetylmuramoyl-l-alanine amidase | SAMEA3472056_04624 | Not Available | Positive | 4718192 - 4719445 | 45624.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





