Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron/manganese transport system periplasmic binding protein sita | SAMEA3472056_04491 | Not Available | Positive | 4590238 - 4591152 | 33488.2 |
| iron abc transporter atp-binding protein | SAMEA3472056_04492 | Not Available | Positive | 4591152 - 4591979 | 30057.4 |
| iron abc transporter permease | SAMEA3472056_04493 | Not Available | Positive | 4591976 - 4592833 | 30815.6 |
| iron/manganese transport system membrane protein sitd | SAMEA3472056_04494 | Not Available | Positive | 4592830 - 4593687 | 30618.8 |
| phage tail domain-containing protein | SAMEA3472056_04496 | Not Available | Negative | 4594484 - 4596520 | 71848.5 |
| starvation sensing protein rspa | SAMEA3472056_04558 | Not Available | Negative | 4641368 - 4642582 | 45971.9 |
| inner membrane protein | SAMEA3472056_04559 | Not Available | Negative | 4642763 - 4643113 | 12923.4 |
| protein | SAMEA3472056_04560 | Not Available | Positive | 4643248 - 4643589 | 12943.4 |
| spermidine n1-acetyltransferase | SAMEA3472056_04561 | Not Available | Positive | 4643624 - 4644184 | 21902.3 |
| lipoprotein | SAMEA3472056_04562 | Not Available | Negative | 4644187 - 4644933 | 27876.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





