Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein | SAMEA3472056_04458 | Not Available | Negative | 4547980 - 4549323 | 50987.5 |
| transcriptional regulator | SAMEA3472056_04459 | Not Available | Positive | 4549540 - 4550463 | 33336.4 |
| methyl-accepting chemotaxis protein iii (ribose an galactose chemoreceptor protein) | SAMEA3472056_04460 | Not Available | Negative | 4550501 - 4552141 | 58911.4 |
| uncharacterised protein | SAMEA3472056_04462 | Not Available | Negative | 4552751 - 4552924 | 5860.19 |
| cytochrome b561 | SAMEA3472056_04464 | Not Available | Negative | 4553169 - 4553699 | 20287.7 |
| glyceraldehyde-3-phosphate dehydrogenase | SAMEA3472056_04465 | Not Available | Positive | 4553888 - 4554889 | 35749.7 |
| aldehyde dehydrogenase a | SAMEA3472056_04466 | Not Available | Negative | 4554931 - 4556370 | 52269.8 |
| conserved sam-binding protein, duf218 family | SAMEA3472056_04467 | Not Available | Negative | 4556567 - 4557367 | 29727.4 |
| uncharacterised protein | SAMEA3472056_04468 | Not Available | Negative | 4557483 - 4557860 | 14122.9 |
| uncharacterised protein | SAMEA3472056_04469 | Not Available | Negative | 4557986 - 4558417 | 17495.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





