Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose transporter xyle | SAMEA3472056_04377 | Not Available | Negative | 4456081 - 4457556 | 53669.2 |
| maltose transporter permease | SAMEA3472056_04378 | Not Available | Negative | 4457928 - 4458818 | 32227.3 |
| maltose transporter membrane protein | SAMEA3472056_04379 | Not Available | Negative | 4458833 - 4460377 | 57016.6 |
| maltose transport system, substrate-binding protein | SAMEA3472056_04380 | Not Available | Negative | 4460531 - 4461721 | 43389.9 |
| maltose/maltodextrin transporter atp-binding protein | SAMEA3472056_04381 | Not Available | Positive | 4462086 - 4463201 | 41005.1 |
| maltoporin (maltose-inducible porin) | SAMEA3472056_04382 | Not Available | Positive | 4463273 - 4464613 | 49901.8 |
| maltose regulon periplasmic protein | SAMEA3472056_04383 | Not Available | Positive | 4464856 - 4465776 | 31935.2 |
| putative type iii effector protein | SAMEA3472056_04384 | Not Available | Positive | 4466005 - 4467204 | 46582.6 |
| putative type iii effector protein | SAMEA3472056_04385 | Not Available | Positive | 4467201 - 4467584 | 14934.7 |
| chorismate lyase | SAMEA3472056_04386 | Not Available | Positive | 4467807 - 4468304 | 18795.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





