Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | SAMEA3472056_04272 | Not Available | Positive | 4347665 - 4347994 | 11807.2 |
| transcription termination factor rho | SAMEA3472056_04273 | Not Available | Positive | 4348321 - 4349580 | 47007.1 |
| uncharacterised protein | SAMEA3472056_04274 | Not Available | Positive | 4349590 - 4349808 | 8232.32 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyltransferase | SAMEA3472056_04275 | Not Available | Positive | 4349820 - 4350923 | 40959.7 |
| enterobacterial common antigen (eca) polysaccharide chain length modulation protein | SAMEA3472056_04276 | Not Available | Positive | 4350935 - 4351981 | 39491.3 |
| udp-n-acetylglucosamine 2-epimerase | SAMEA3472056_04277 | Not Available | Positive | 4352037 - 4353167 | 42232.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | SAMEA3472056_04278 | Not Available | Positive | 4353164 - 4354426 | 45841.3 |
| dtdp-glucose 4,6-dehydratase | SAMEA3472056_04279 | Not Available | Positive | 4354426 - 4355493 | 39736.9 |
| glucose-1-phosphate thymidylyltransferase | SAMEA3472056_04280 | Not Available | Positive | 4355512 - 4356393 | 32736.3 |
| tdp-fucosamine acetyltransferase | SAMEA3472056_04281 | Not Available | Positive | 4356371 - 4357045 | 24221.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





