Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino-acid aminotransferase | SAMEA3472056_04262 | Not Available | Positive | 4334428 - 4335357 | 34095.6 |
| dihydroxy-acid dehydratase | SAMEA3472056_04263 | Not Available | Positive | 4335422 - 4337272 | 65565.4 |
| threonine dehydratase | SAMEA3472056_04264 | Not Available | Positive | 4337275 - 4338819 | 56187.4 |
| dna-binding transcriptional regulator ilvy | SAMEA3472056_04265 | Not Available | Negative | 4338871 - 4339764 | 33220.3 |
| ketol-acid reductoisomerase | SAMEA3472056_04266 | Not Available | Positive | 4339914 - 4341389 | 54053.1 |
| peptidyl-prolyl cis-trans isomerase c | SAMEA3472056_04267 | Not Available | Negative | 4341435 - 4341716 | 10232.6 |
| yifn | SAMEA3472056_04268 | Not Available | Negative | 4341915 - 4342364 | 16982.6 |
| atp-dependent dna helicase | SAMEA3472056_04269 | Not Available | Positive | 4342581 - 4344602 | 77081.6 |
| guanosine pentaphosphate phosphohydrolase | SAMEA3472056_04270 | Not Available | Negative | 4344649 - 4346133 | 54915.5 |
| putative atp-dependent rna helicase | SAMEA3472056_04271 | Not Available | Negative | 4346269 - 4347534 | 47075.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





