Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMEA3472056_04250 | Not Available | Positive | 4324488 - 4325474 | 36231.2 |
| putative ph-induced membrane-bound redox modulator | SAMEA3472056_04252 | Not Available | Positive | 4325758 - 4326723 | 35983.1 |
| putative transport protein | SAMEA3472056_04253 | Not Available | Positive | 4327268 - 4328512 | 43480.4 |
| Trna-asp | Not Available | Not Available | Positive | 4328814 - 4328890 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 4328899 - 4328974 | Not Available |
| lysr-family transcriptional regulator (h-ns-dependent flhd regulator) | SAMEA3472056_04257 | Not Available | Negative | 4329070 - 4329909 | 31778.0 |
| protein yife | SAMEA3472056_04258 | Not Available | Positive | 4330028 - 4330366 | 13134.2 |
| putative magnesium chelatase | SAMEA3472056_04259 | Not Available | Negative | 4330391 - 4331911 | 55183.7 |
| acetolactate synthase isozyme ii large subunit | SAMEA3472056_04260 | Not Available | Positive | 4332502 - 4334148 | 59167.2 |
| acetolactate synthase isozyme ii small subunit | SAMEA3472056_04261 | Not Available | Positive | 4334145 - 4334408 | 9703.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





