Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | SAMEA3472056_04503 | Not Available | Negative | 4604290 - 4604619 | 12487.0 |
| Tail component | SAMEA3472056_04504 | Not Available | Negative | 4604616 - 4607177 | 92501.1 |
| Tail component | SAMEA3472056_04505 | Not Available | Negative | 4607170 - 4607604 | 16092.0 |
| Tail component | SAMEA3472056_04506 | Not Available | Negative | 4607586 - 4608008 | 15590.4 |
| Major tail protein v | SAMEA3472056_04507 | Not Available | Negative | 4608024 - 4608764 | 25763.2 |
| Tail component | SAMEA3472056_04508 | Not Available | Negative | 4608772 - 4609167 | 14649.9 |
| Tail component | SAMEA3472056_04509 | Not Available | Negative | 4609164 - 4609742 | 21521.0 |
| Head-tail joining protein | SAMEA3472056_04510 | Not Available | Negative | 4609754 - 4610107 | 12779.8 |
| Dna packaging protein | SAMEA3472056_04511 | Not Available | Negative | 4610119 - 4610514 | 13875.2 |
| Capsid component | SAMEA3472056_04512 | Not Available | Negative | 4610556 - 4611581 | 38133.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





