Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative amino acid permease | SAMEA3472056_04240 | Not Available | Positive | 4312463 - 4313455 | 35704.6 |
| uncharacterised protein | SAMEA3472056_04241 | Not Available | Positive | 4313589 - 4314659 | 40078.5 |
| glycosyl hydrolase | SAMEA3472056_04242 | Not Available | Positive | 4314676 - 4315977 | 48881.6 |
| glycosyl hydrolase | SAMEA3472056_04243 | Not Available | Positive | 4315978 - 4317027 | 39377.0 |
| uncharacterised protein | SAMEA3472056_04244 | Not Available | Positive | 4317319 - 4318863 | 56601.8 |
| 2,4-dienoyl-coa reductase | SAMEA3472056_04245 | Not Available | Positive | 4319167 - 4321185 | 72641.4 |
| putative dna-binding protein | SAMEA3472056_04246 | Not Available | Negative | 4321230 - 4321646 | 15038.4 |
| putative enzyme | SAMEA3472056_04247 | Not Available | Negative | 4321916 - 4323052 | 42302.8 |
| metal dependent hydrolase | SAMEA3472056_04248 | Not Available | Positive | 4323137 - 4323640 | 19456.6 |
| thioredoxin-like protein | SAMEA3472056_04249 | Not Available | Positive | 4323717 - 4324409 | 25663.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





