Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 4301387 - 4301462 | Not Available |
| siderophore-interacting protein | SAMEA3472056_04231 | Not Available | Negative | 4301515 - 4302279 | 28956.1 |
| putative transcriptional regulator | SAMEA3472056_04232 | Not Available | Positive | 4302567 - 4303190 | 23416.7 |
| aerotaxis receptor protein | SAMEA3472056_04233 | Not Available | Negative | 4303344 - 4304864 | 55116.1 |
| putrescine--2-oxoglutarate aminotransferase | SAMEA3472056_04234 | Not Available | Positive | 4305171 - 4306661 | 53855.5 |
| putative trna-binding protein | SAMEA3472056_04235 | Not Available | Negative | 4306703 - 4307035 | 12331.1 |
| ebg operon repressor | SAMEA3472056_04236 | Not Available | Positive | 4307254 - 4308237 | 36253.5 |
| cryptic beta-d-galactosidase subunit alpha | SAMEA3472056_04237 | Not Available | Positive | 4308421 - 4311513 | 117889.0 |
| evolved beta-galactosidase subunit beta | SAMEA3472056_04238 | Not Available | Positive | 4311510 - 4311959 | 17457.6 |
| putative amino acid permease | SAMEA3472056_04239 | Not Available | Positive | 4312022 - 4312441 | 15661.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





