Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate acyltransferase plsy | SAMEA3472056_04220 | Not Available | Positive | 4290483 - 4291100 | 22194.7 |
| transcriptional activator ttdr | SAMEA3472056_04221 | Not Available | Negative | 4291113 - 4292045 | 35344.7 |
| l-tartrate dehydratase subunit alpha | SAMEA3472056_04222 | Not Available | Positive | 4292252 - 4293163 | 32678.4 |
| l-tartrate dehydratase subunit beta | SAMEA3472056_04223 | Not Available | Positive | 4293160 - 4293765 | 22661.7 |
| putative tartrate carrier protein | SAMEA3472056_04224 | Not Available | Positive | 4293813 - 4295276 | 52884.5 |
| o-sialoglycoprotein endopeptidase | SAMEA3472056_04225 | Not Available | Negative | 4295319 - 4296332 | 35994.5 |
| 30s ribosomal protein s21 | SAMEA3472056_04226 | Not Available | Positive | 4296570 - 4296785 | 8500.42 |
| dna primase | SAMEA3472056_04227 | Not Available | Positive | 4296896 - 4298641 | 65549.4 |
| rna polymerase | SAMEA3472056_04228 | Not Available | Positive | 4298836 - 4300677 | 70211.2 |
| g/u mismatch-specific dna glycosylase | SAMEA3472056_04229 | Not Available | Negative | 4300756 - 4301262 | 18674.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





