Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthesis protein glgs | SAMEA3472056_04208 | Not Available | Negative | 4277528 - 4277728 | 7922.34 |
| membrane protein yqij | SAMEA3472056_04209 | Not Available | Positive | 4277997 - 4278626 | 23088.5 |
| inner membrane protein yqik | SAMEA3472056_04210 | Not Available | Positive | 4278653 - 4280314 | 60607.1 |
| bifunctional protein hlde | SAMEA3472056_04213 | Not Available | Negative | 4281108 - 4282541 | 51053.6 |
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | SAMEA3472056_04214 | Not Available | Negative | 4282589 - 4285429 | 108367.0 |
| putative adenylate cyclase | SAMEA3472056_04215 | Not Available | Negative | 4285452 - 4286753 | 48451.8 |
| signal transduction protein | SAMEA3472056_04216 | Not Available | Positive | 4286995 - 4287615 | 23077.7 |
| multifunctional cca protein | SAMEA3472056_04217 | Not Available | Positive | 4287679 - 4288917 | 46577.9 |
| undecaprenyl pyrophosphate phosphatase | SAMEA3472056_04218 | Not Available | Negative | 4289098 - 4289919 | 29774.7 |
| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase | SAMEA3472056_04219 | Not Available | Negative | 4290010 - 4290378 | 13620.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





