Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative regulatory protein | SAMEA3472056_04187 | Not Available | Negative | 4261063 - 4261545 | 17842.2 |
| protein ygiw | SAMEA3472056_04188 | Not Available | Negative | 4261598 - 4261990 | 14011.5 |
| two-component system response regulator | SAMEA3472056_04189 | Not Available | Positive | 4262142 - 4262801 | 24747.2 |
| two-component system sensor kinase | SAMEA3472056_04190 | Not Available | Positive | 4262798 - 4264147 | 50275.8 |
| inner membrane protein | SAMEA3472056_04191 | Not Available | Negative | 4264193 - 4264525 | 13253.6 |
| modulator of drug activity b | SAMEA3472056_04192 | Not Available | Positive | 4264883 - 4265464 | 21892.1 |
| putative monooxygenase | SAMEA3472056_04193 | Not Available | Positive | 4265495 - 4265809 | 11533.1 |
| topoisomerase iv subunit b | SAMEA3472056_04194 | Not Available | Negative | 4265857 - 4267749 | 70247.9 |
| esterase | SAMEA3472056_04195 | Not Available | Negative | 4267778 - 4268359 | 21642.7 |
| putative phosphoesterase | SAMEA3472056_04196 | Not Available | Negative | 4268359 - 4269186 | 30939.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





