Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator yqhc | SAMEA3472056_04177 | Not Available | Negative | 4247500 - 4248456 | 36080.0 |
| putative alcohol dehydrogenase | SAMEA3472056_04178 | Not Available | Positive | 4248593 - 4249756 | 42125.5 |
| 2,5-diketo-d-gluconic acid reductase a | SAMEA3472056_04179 | Not Available | Positive | 4249861 - 4250688 | 31111.4 |
| protein of uncharacterised function (duf3828) | SAMEA3472056_04180 | Not Available | Positive | 4250888 - 4251814 | 34984.0 |
| putative lipoprotein | SAMEA3472056_04181 | Not Available | Positive | 4251863 - 4252120 | 9499.55 |
| radical sam superfamily protein | SAMEA3472056_04182 | Not Available | Negative | 4252163 - 4254382 | 83429.4 |
| sufi protein | SAMEA3472056_04183 | Not Available | Negative | 4254493 - 4255905 | 51834.1 |
| 1-acylglycerol-3-phosphate o-acyltransferase | SAMEA3472056_04184 | Not Available | Negative | 4255980 - 4256717 | 27401.7 |
| topoisomerase iv subunit a | SAMEA3472056_04185 | Not Available | Negative | 4256951 - 4259209 | 83836.3 |
| binding protein | SAMEA3472056_04186 | Not Available | Negative | 4259347 - 4260954 | 60801.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





